I'm looking for the equivalent of what Javadoc is to Java and from that, a way to standardize code documentation. Is doxygen more common in this context. Are there built-in, IDE-dependent options? I'm interesting in documenting a project in MPLABX.
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10Doxygen is really a standard for anything else but Java (can also be used instead of Javadoc.) – Dzarda Dec 10 '14 at 19:39
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DoxyGen indeed. But, I've even seen programs where you put in your source code and they will generate class diagrams for your project. But well, don't think it'll work for C that way, as it's does not really have classes. Possibilities enough, but DoxyGen is preferred/most used, probably. – Paul Apr 01 '15 at 19:55
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Doxygen is the best option for generating documentation from code comments. It is also heavily used in industry to generate documentation for embedded C projects. If you are using MPLABX (which is actually a netbeans ide), there is plugin for doxygen available, see below link: http://plugins.netbeans.org/plugin/14326/doxygen-integration

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Well, there is a DoxyGen stand-alone something, you have to specify your project folder and it will then create the output/documentary for it. (If you have the comment syntax right.) – Paul Apr 01 '15 at 19:52